
It was originally designed for the analysis of biological networks, which remains as its main application, but can also be used for general purpose network analysis. It is an open-source, Java-based, multi-platform desktop application that is widely used for network representation, integration and analysis (Figure 21). Assessing reliability and measuring confidenceĪll materials are free cultural works licensed under a Creative CommonsĪttribution 4.0 International (CC BY 4.0) license, except where further licensing details are provided.Ĭytoscape is one of the most popular network analysis tools.

Network representation and analysis tools.Properties of PPINs: scale-free networks.

Properties of PPINs: small world effect.

